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Available tutorials and videos

Introduction to PANACEA Web Sites

PANACEA Web Sites from IULA UPF on Vimeo.

We recommend you to watch the videos in High Definition and in full screen mode.

Tutorials

Documentation Index:

  • PANACEA-Platform_documentation_index_v3.0.pdf


    • General PANACEA tutorial:

  • PANACEA-tutorial_v3.0.pdf

    • Specific PANACEA tutorials:

    1. Do you want to share your tools? Do you want to deploy your command line tools as web services?

  • You can use Soaplab! http://soaplab.sourceforge.net/soaplab2
  • PANACEA-Soaplab-tutorial_v3.0.pdf

    • 2. Do you want to find web services? Do you want to test tools without the installation process? Do you want to share your web services and make them public?

  • Use the PANACEA Registry to search and find web services: registry.elda.org
  • How to Register services in PANACEA-v4.pdf

    • 3. Do you want to chain some web services?

    You can chain web services with Python, Java, etc. but if you want a nice GUI to create complex workflows and benefit from many other features you can use TAVERNA
  • We recommend Taverna 2.4: taverna.org.uk
  • PANACEA-Taverna-tutorial_v3.0.pdf
  • MyGrid Taverna tutorial: The best Taverna tutorial and reference. It has a very useful search feature.

    • 4. Do you want to find workflow examples? Do you want to share your workflow with the community or only with some collegues?

  • You can find example workflows on the PANACEA myExperiment portal: myexperiment.elda.org
  • You can also find many workflow examples from other research fields in the original myExperiment portal: www.myexperiment.org
  • How to Register workflows in PANACEA-v1.pdf

    • 5. Do you want to make your web services more robust? Are you designing a workflow to process large corpora?

  • PANACEA-Massive-data-tutorial_v1.1.pdf



    • Videos

    Also available are the following video tutorials of PANACEA tools.

    Click to view

    We recommend you to watch the videos in High Definition and in full screen mode.

  • PANACEA Find and run a workflow

    • PANACEA Find and run a workflow from IULA UPF on Vimeo.

  • PANACEA Building a workflow from scratch

    • PANACEA Building a workflow from scratch from IULA UPF on Vimeo.

  • PANACEA Registry

    • PANACEA Registry from IULA UPF on Vimeo.

  • How to register Soaplab web services in the PANACEA Registry

    • How to register Soaplab web services in the PANACEA Registry from IULA UPF on Vimeo.

  • How to register SOAP web services in the PANACEA Registry

    • How to register SOAP web services in the PANACEA Registry from IULA UPF on Vimeo.

  • PANACEA myExperiment

    • PANACEA MyExperiment from IULA UPF on Vimeo.

  • How to register workflows in the PANACEA myExperiment

    • How to register workflows in the PANACEA myExperiment from IULA UPF on Vimeo.

  • PANACEA Part of Speech Tagging

    • PANACEA Part of Speech Tagging from IULA UPF on Vimeo.

  • PANACEA Bilingual Crawler

    • PANACEA Bilingual Crawler from IULA UPF on Vimeo.

  • Taverna and lists v01

    • Taverna and lists v01 from IULA UPF on Vimeo.

  • Taverna correctly annotating workflows v01

    • Taverna correctly annotating workflows v01 from IULA UPF on Vimeo.